PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D01G0023
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 264aa    MW: 28662.8 Da    PI: 6.2329
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D01G0023genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.36.8e-0888147359
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele...elkkevakl 59 
                  e k  +r   NReA r++Rq+ ka+ + Le++v  L + N++L k+l+   +l+ e+a+l
  Gh_D01G0023  88 EKKPKKRSLGNREAVRKYRQKVKARAASLEDEVVRLRTLNQQLLKRLQgqaQLEAEIARL 147
                  668889999************************************998333455555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.0E-1285154No hitNo description
SMARTSM003385.6E-686153IPR004827Basic-leucine zipper domain
CDDcd146863.80E-1087145No hitNo description
PfamPF077163.3E-1288143IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.32E-690137No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MDEGELDFSN HEVFSGGNSM GDIPSSCSMD SFFNEILNDS HACTHTHTCN PPGPDNSHTH  60
TCFHVHTKIV PASTEDEAAA DDTEGSREKK PKKRSLGNRE AVRKYRQKVK ARAASLEDEV  120
VRLRTLNQQL LKRLQGQAQL EAEIARLKCL LVDVRGRIEG EIGSFPYQKP TANNVNTLNL  180
PGAYLMNPCN IQCNDQMYCL QPEVEGNTGE ATALDGHGFN GCEFDDIQCL ASQNTGAKEL  240
PGGGVGSAAS NGNSSGTKRR KGKI
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO1098731170.0
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ3550300.0DQ355030.1 Gossypium hirsutum putative retinoblastoma binding protein gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012449574.10.0PREDICTED: uncharacterized protein LOC105772694 isoform X1
SwissprotQ8GTS21e-111BZP23_ARATH; Basic leucine zipper 23
TrEMBLA0A0D2NG610.0A0A0D2NG61_G
STRINGVIT_03s0038g02420.t011e-133(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM20362879
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.11e-105bZIP family protein